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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5770568 chr22:49985339 C/T HPS4 chr22:26839389-26879803:- 0.51 6.11 2.12E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T NHP2L1 chr22:42069934-42086508:- 0.57 7.25 1.65E-12 Box Plot
THCA rs5770568 chr22:49985339 C/T NOL12 chr22:38077680-38089485:+ 0.37 5.88 7.69E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T PATZ1 chr22:31721790-31742218:- 0.44 6.18 1.38E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T PPIL2 chr22:22020298-22054304:+ 0.53 6.5 2.03E-10 Box Plot
THCA rs5770568 chr22:49985339 C/T RNF185 chr22:31556169-31603005:+ 0.5 5.91 6.34E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T RPL3 chr22:39708887-39716394:- 0.49 6.07 2.56E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T TOM1 chr22:35695268-35743987:+ 0.51 5.92 6.12E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T TXN2 chr22:36863083-36878077:- 0.44 6.09 2.31E-9 Box Plot
THCA rs57713596 chr6:27004098 C/T ZFP57 chr6:29640169-29648887:- 0.53 5.92 6.12E-9 Box Plot
THCA rs57732631 chr2:132209518 GTAATT/G CCDC74B chr2:130896860-130902707:- 0.36 6.58 1.27E-10 Box Plot
THCA rs57734240 chr1:121252474 C/CT NBPF14 chr1:148003642-148025863:- 0.42 9.71 1.84E-20 Box Plot
THCA rs577482 chr5:49538829 A/G LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.16E-13 Box Plot
THCA rs57781286 chr14:39816559 C/T LOC647288 chr13:75811890-75814517:- -0.52 -9.54 7.4E-20 Box Plot
THCA rs57786650 chr17:18201680 A/G LOC162632 chr17:16614993-16707819:+ 0.38 6.25 9.05E-10 Box Plot